Global Arguments
Overview of global arguments available in MetriCal commands.
MetriCal is a powerful program with many different tools to help you calibrate your system. Each one is designed for a specific purpose, and can be used in conjunction with other commands to achieve your desired calibration results.
MetriCal commands can be run either through a manifest file (see the New and Run commands) or directly via the command line interface. The manifest file is a TOML file that contains all the necessary information to run a standard calibration workflow, while the CLI allows you to run commands one-by-one directly from the terminal.
Though there's no "right" way to use MetriCal, we recommend using the manifest file for most users, as it allows for easier reproducibility and version control while also double-checking dependencies and I/O logic. The CLI is best suited for debugging and rapid testing; in fact, there are commands specifically designed for debugging purposes that are not available for use in the manifest file.

Render a dataset. Apply the calibrated plex and render the fused data.